IPSDK 0.2
IPSDK : Image Processing Software Development Kit

Compute the sphericity of a 3d shape.

Defined by Wadell in 1935, the sphericity of a shape is the ratio of the surface area of a sphere with the same volume as the shape to the surface area of the shape:

\[ Sphericity = \frac{\pi^{\frac{1}{3}} (6 V)^{\frac{2}{3}}}{A} \]

Where $ A $ is the shape area, calculated with Area3d, and $ V $ is the shape volume, calculated with Volume3d.

Here is an example of sphericity measurement :

sphericity3dMsr.png

Compute the sphericity of a 3d shape

Measure synthesis :

Measure Type Measure Unit Type Parameter Type Result Type Shape Requirements
Generic.png
Generic
none.png
None
parameter.png
Sphericity3dMsrParams
Value.png
Value (ipsdk::ipReal64)
Both.png
Both
See Shape measurement for additional information on these pictograms

Example of Python code :

Generic example in 3d case :

import PyIPSDK
import PyIPSDK.IPSDKIPLShapeAnalysis as shapeanalysis
# Create the infoset
inMeasureInfoSet3d = PyIPSDK.createMeasureInfoSet3d()
PyIPSDK.createMeasureInfo(inMeasureInfoSet3d, "Sphericity3dMsr")
#Perform the analysis
outMeasureSet = shapeanalysis.labelAnalysis3d(inGreyImg, inLabelImg, inMeasureInfoSet3d)
# save results to csv format
PyIPSDK.saveCsvMeasureFile(os.path.join(tmpPath, "shape_analysis_results.csv"), outMeasureSet)
# retrieve measure results
outMsr = outMeasureSet.getMeasure("Sphericity3dMsr")
# retrieve measure values
outMsrValues = outMsr.getMeasureResult().getColl(0)
print("First label measurement equal " + str(outMsrValues[1]))

Example of C++ code :

Example informations

Associated library

IPSDKIPLShapeAnalysis

Code Example

// opening grey level input image
ImagePtr pInGreyImg3d = loadTiffImageFile(inputGreyImgPath, eTiffDirectoryMode::eTDM_Volume);
// read entity shape 3d collection used for processing
Shape3dCollPtr pShape3dColl = boost::make_shared<Shape3dColl>();
readFromBinaryFile(inputShape3dCollPath, *pShape3dColl);
// define a measure info set
MeasureInfoSetPtr pMeasureInfoSet = MeasureInfoSet::create3dInstance();
createMeasureInfo(pMeasureInfoSet, "Sphericity3dMsr", createHolesBasicPolicyMsrParams(bProcessHoles));
// compute measure on shape 3d collection
MeasureSetPtr pOutMeasureSet = shapeAnalysis3d(pInGreyImg3d, pShape3dColl, pMeasureInfoSet);
// retrieve associated results
const MeasureConstPtr& pSphericity3dOutMsr = pOutMeasureSet->getMeasure("Sphericity3dMsr");
const ipsdk::shape::analysis::ValueMeasureResult<ipsdk::ipReal64>& outResults = static_cast<const ipsdk::shape::analysis::ValueMeasureResult<ipsdk::ipReal64>&>(pSphericity3dOutMsr->getMeasureResult());